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Itk metaimage to dicom how to#

statisticsEstimators: compute satistics (L1, L2, Loo) from results of two estimators.generic3dNormalEstimators: Computes a normal vector field over a digitized 3D implicit surface for several estimators (II|VCM|Trivial|True).lengthEstimator: program to generate multigrid analysis of length estimators.euleurCharacteristic : bruteforce tool to extract (volumetric) Euler characteristic from volumetric binary object.curvatureScaleSpaceBCC: a tool to display the curvature scale space of a given contour with the Binomial Convolver Curvature Estimator.curvatureMCMS: curvature estimator using the maximal segments cover (to be updated for current DGtal version).curvatureBC: curvature estimator using the Binomial convolver.3dLocalEstimators: program to compare 3D local curvature estimators (mean, gaussian and principal curvatures) on 3D implicit shapes with integral invariant and monge via jet fitting (with also noise robustness measure).2dLocalEstimators: program to compare local curvature/tangent estimators on implicit shapes:ģdCurveTangentEstimator: to estimate the tangent vector to a set of 3D integer points, which are supposed to approximate a 3D curve.volBoundary2obj: a simple tool to export the boundary of a an object in a volumetric file to OBJ.volAddNoise: a new tool to add noise (Kanungo’s) to a binary 3D object.vol2vox/vox2vol: tools to convert vol file to a MagicaVoxel VOX file and conversly.vol2slice: tool to extract all slices from 3d volumic images.vol2sdp : a simple tools to extract digital points from 3d vol files.vol2raw: convert a vol to a 8-bit raw file.vol2obj: convert a volume file into OBJ format (all voxels belonging to threshold interval).vol2heightfield: a new tool to transform volumetric file into 2D heightmap.slice2vol: tool to merge slices into one 3d volumic file.sdp2vol: a simple tool to create a 3d vol image from 3d digital points.raw2vol and vol2raw: transform 3D volumes files from (resp.ofs2off: convert OFS mesh format towards a OFF variant.mesh2vol: Convert a mesh file into a 26-separated or 6-separated voxelization in a given resolution grid.mesh2heightfield: new tool to convert a mesh file into a 2D height map (from a normal direction N and from a starting point P).longvol2vol: convert longvol to vol file using different conversion policies.

itk2vol: convert any image of itk format (mhd, mha, …) to vol (available with the itk option in DGtal).

imgAddNoise: a new tool to add noise (Kanungo’s) to a binary 2D object.

img2freeman: to extract a freeman chain contour from a grayscale image.

heightfield2vol: a new tool to transform 2D heightmap into volumetric file.

heightfield2shading: a new tool to render a 2D heightfield image into a shading one.

HDF52vol: convert HDF5 to vol file format.

freeman2sdp: convert freeman chain towards a Sequence of Discrete Points.

freeman2img: transform one or several freeman chains into a pgm file by filling their interior areas.dicom2vol: convert dicom images into 3d volumic file (need itk option in DGtal).convertVol: a simple generic volume image converters (can process actually pgm3d, vol, longvol, raw (for writing)).converters/: utilities to convert various simple file formats:.(see also the nightly build doxygen documentation of the tools) DGtalTools content:Īt the moment the DGTalTools project is organized as follows ( new or improved in 1.3):

Itk metaimage to dicom how to#

The source code of the tools can also be used to non DGtal familiar user to show how to include the DGtal library framework directly in their own source code (in complement of DGtal tutorial ).

Provide useful tools of digital image related algorithms (extraction of connected components, digital contour/surface extraction, simple visualization tools…).

Simplify comparisons of different algorithms with an single framework.

Construct demonstration tools like online demonstrations (as for instance the one of the Image Processing Online).

Share and apply DGtal algorithms to various data from different domains.

Note that in complement to DGtalTools, the DGtalTools-contrib project was added to gather specific research tools or prototypes. The main goal of this part is to gather simple and useful tools exploiting the structures and algorithms defined in DGtal. DGtalTools is a separate github project containing tools constructed using DGtal library.